Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909136.1_cds_XP_016459363.1_52897
CDS Infomation

[gene=LOC107782929] [db_xref=GeneID:107782929] [protein=putative amidohydrolase YtcJ isoform X3] [protein_id=XP_016459363.1] [location=join(56703..56810,57628..57700,58963..59069,59154..59277,62973..63167,64591..64676,65532..65639,66310..66405,66492..66590,66721..66795,67798..67929,68026..68141,69001..69199)] [gbkey=CDS]
Sequence

ATGCAGAAATTGGCAAGGACTTTGACTAAGGAGCTAAATCTACATGGAAAGATTGTGGTC
CCTGGATTTATTGATTCCCATGTGCACTTCATCCCTGGGGGATTACAGATGGCACGAGTG
GAGCTTCGTGGAGTAAATACAAAAGATCTTTTTGTGGAAAAAATTAGAAAAGCAGTTGCA
AATGTGAAAGAAGGTTCTTGGTTACTGGGTGGTGGTTGGAATAATGATATTTGGGGAGGT
GATTTGCCAATGGCCGCGTGGATTGATAGTGTTACTCCTCATAATCCAGTCTGGTTAGCA
AGGATGGATGGTCATATGGGTTTGGCTAATACGTTGGCTCTAACACTTGCTGGTATTTCA
CGTAACAACGAGAATCCAAATGGTGGAGCTATCATTAGAAATAATGACGGGGAACCTACT
GGCCTGTTGATTGATTCTGCTATGAAGCTTGTCCTTCCCCACATCCCAGAAGCCTCAGTT
GATGAAAGGAGGGAAGCTCTGTTAAGAGCTAGCAGCCATGCATTGAAGAGGGGTGTCACA
ACAGTTGTGGATTTTGGCAGATATTTTCCAGGGTCTTCACCTGAGTACCCGTGGGACGAC
TTTTCAGATGTATATAGATGGGCTGATTTATCCGGAAATATGATGACCAGAATTTGCTTA
TTCTTTCCAATGGAGACATGGTCACGGTTAGTGGATCTTATGAGCAAGTCAGGCCGCGTG
CTGAGCCAATGGATTTATTTAGGCGGTGTCAAGGCTTTTGCTGATGGATCTCTAGGGTCT
AACAGTGCATTCTTTCATGAGCCATATGCTGATGATCTAAACAATTATGGGCTACAAGTA
GTGGATCTGGATAGTCTATACAACATGACTTTTTCTTCAGATAAATCTGGCCTTCAGGTT
AGCATCCATGCTATAGGTGACAGAGCTAATGACTTGATATTGGATATGTATGCTTCTGTG
GCCTCTGACAAACAAATTAGAGACCGACGATTTAGGATTGAGCATGCTCAACATTTGGCC
CCAGGAACAGTGGCTCGTTTTGGTGAACAATCTGTAGTTGCTTCAGTGCAGCCAGATCAC
TTATTGGATGATGCTGATTCTGCATCTAAAAAACTTGGGTGTGAAAGGGCTGAAAGAGGA
TCTTATCTATTCAAGTCACTCTTGACTAAGAATGCACAATTGGCATTTGGCTCGGATTGG
CCGGTAGCAGATATTAATCCTTTGAAAAGCATTAGGACATCGATGAAGAGAGTACCTCCT
GGTTGGGAAAAGGCTTGGATTCCATCAGAGTGCTTGTGTCTCAAAGATGCATTAAATGCG
TACACCATTTCGGCTGCTCATGCTTGTTTTCTTGATAAATATGTTGGATCATTGTCTCCG
GGAAAATATGCGGATTTTGTCGTTTTGTCAACTAACTCATGGGAAGACTTTGCAACTGAA
GTTTTTGCTAATGTTGAGGCAACATATGTTGGTGGCTTCAAGGCTTACTCCATAAGACCT
GAGGATAAAAGTGAATAG

Peptide Sequence

PEP ID

XP_016459363.1
PEP Infomation

PREDICTED: putative amidohydrolase YtcJ isoform X3 [Nicotiana tabacum]
Sequence

MQKLARTLTKELNLHGKIVVPGFIDSHVHFIPGGLQMARVELRGVNTKDLFVEKIRKAVA
NVKEGSWLLGGGWNNDIWGGDLPMAAWIDSVTPHNPVWLARMDGHMGLANTLALTLAGIS
RNNENPNGGAIIRNNDGEPTGLLIDSAMKLVLPHIPEASVDERREALLRASSHALKRGVT
TVVDFGRYFPGSSPEYPWDDFSDVYRWADLSGNMMTRICLFFPMETWSRLVDLMSKSGRV
LSQWIYLGGVKAFADGSLGSNSAFFHEPYADDLNNYGLQVVDLDSLYNMTFSSDKSGLQV
SIHAIGDRANDLILDMYASVASDKQIRDRRFRIEHAQHLAPGTVARFGEQSVVASVQPDH
LLDDADSASKKLGCERAERGSYLFKSLLTKNAQLAFGSDWPVADINPLKSIRTSMKRVPP
GWEKAWIPSECLCLKDALNAYTISAAHACFLDKYVGSLSPGKYADFVVLSTNSWEDFATE
VFANVEATYVGGFKAYSIRPEDKSE

Transcript Sequence

Gene sequence data has not been registered.